"use strict";

function _typeof(obj) { "@babel/helpers - typeof"; return _typeof = "function" == typeof Symbol && "symbol" == typeof Symbol.iterator ? function (obj) { return typeof obj; } : function (obj) { return obj && "function" == typeof Symbol && obj.constructor === Symbol && obj !== Symbol.prototype ? "symbol" : typeof obj; }, _typeof(obj); }

require("core-js/modules/es.object.to-string.js");

require("core-js/modules/es.reflect.construct.js");

require("core-js/modules/es.object.create.js");

require("core-js/modules/es.object.define-property.js");

require("core-js/modules/es.promise.js");

require("core-js/modules/es.symbol.js");

require("core-js/modules/es.symbol.description.js");

require("core-js/modules/es.symbol.iterator.js");

require("core-js/modules/es.array.iterator.js");

require("core-js/modules/es.string.iterator.js");

require("core-js/modules/web.dom-collections.iterator.js");

Object.defineProperty(exports, "__esModule", {
  value: true
});
exports.OpenTargetSnp = void 0;

require("regenerator-runtime/runtime.js");

require("core-js/modules/es.array.join.js");

require("core-js/modules/es.object.set-prototype-of.js");

require("core-js/modules/es.object.get-prototype-of.js");

var _common = require("../../common");

var _caseFunctions = require("../../common/case-functions");

function asyncGeneratorStep(gen, resolve, reject, _next, _throw, key, arg) { try { var info = gen[key](arg); var value = info.value; } catch (error) { reject(error); return; } if (info.done) { resolve(value); } else { Promise.resolve(value).then(_next, _throw); } }

function _asyncToGenerator(fn) { return function () { var self = this, args = arguments; return new Promise(function (resolve, reject) { var gen = fn.apply(self, args); function _next(value) { asyncGeneratorStep(gen, resolve, reject, _next, _throw, "next", value); } function _throw(err) { asyncGeneratorStep(gen, resolve, reject, _next, _throw, "throw", err); } _next(undefined); }); }; }

function _classCallCheck(instance, Constructor) { if (!(instance instanceof Constructor)) { throw new TypeError("Cannot call a class as a function"); } }

function _defineProperties(target, props) { for (var i = 0; i < props.length; i++) { var descriptor = props[i]; descriptor.enumerable = descriptor.enumerable || false; descriptor.configurable = true; if ("value" in descriptor) descriptor.writable = true; Object.defineProperty(target, descriptor.key, descriptor); } }

function _createClass(Constructor, protoProps, staticProps) { if (protoProps) _defineProperties(Constructor.prototype, protoProps); if (staticProps) _defineProperties(Constructor, staticProps); Object.defineProperty(Constructor, "prototype", { writable: false }); return Constructor; }

function _inherits(subClass, superClass) { if (typeof superClass !== "function" && superClass !== null) { throw new TypeError("Super expression must either be null or a function"); } subClass.prototype = Object.create(superClass && superClass.prototype, { constructor: { value: subClass, writable: true, configurable: true } }); Object.defineProperty(subClass, "prototype", { writable: false }); if (superClass) _setPrototypeOf(subClass, superClass); }

function _setPrototypeOf(o, p) { _setPrototypeOf = Object.setPrototypeOf || function _setPrototypeOf(o, p) { o.__proto__ = p; return o; }; return _setPrototypeOf(o, p); }

function _createSuper(Derived) { var hasNativeReflectConstruct = _isNativeReflectConstruct(); return function _createSuperInternal() { var Super = _getPrototypeOf(Derived), result; if (hasNativeReflectConstruct) { var NewTarget = _getPrototypeOf(this).constructor; result = Reflect.construct(Super, arguments, NewTarget); } else { result = Super.apply(this, arguments); } return _possibleConstructorReturn(this, result); }; }

function _possibleConstructorReturn(self, call) { if (call && (_typeof(call) === "object" || typeof call === "function")) { return call; } else if (call !== void 0) { throw new TypeError("Derived constructors may only return object or undefined"); } return _assertThisInitialized(self); }

function _assertThisInitialized(self) { if (self === void 0) { throw new ReferenceError("this hasn't been initialised - super() hasn't been called"); } return self; }

function _isNativeReflectConstruct() { if (typeof Reflect === "undefined" || !Reflect.construct) return false; if (Reflect.construct.sham) return false; if (typeof Proxy === "function") return true; try { Boolean.prototype.valueOf.call(Reflect.construct(Boolean, [], function () {})); return true; } catch (e) { return false; } }

function _getPrototypeOf(o) { _getPrototypeOf = Object.setPrototypeOf ? Object.getPrototypeOf : function _getPrototypeOf(o) { return o.__proto__ || Object.getPrototypeOf(o); }; return _getPrototypeOf(o); }

var OpenTargetSnp = /*#__PURE__*/function (_Resource) {
  _inherits(OpenTargetSnp, _Resource);

  var _super = _createSuper(OpenTargetSnp);

  function OpenTargetSnp(rsid, chrom, pos, ref, alts, variantIds, frequencyTables, genes, traits) {
    var _this;

    _classCallCheck(this, OpenTargetSnp);

    _this = _super.call(this);
    _this.rsid = rsid;
    _this.chrom = chrom;
    _this.pos = pos;
    _this.ref = ref;
    _this.alts = alts;
    _this.variantIds = variantIds;
    _this.frequencyTables = frequencyTables;
    _this.genes = genes;
    _this.traits = traits;
    return _this;
  }

  _createClass(OpenTargetSnp, [{
    key: "serializeAPI",
    value: function serializeAPI() {
      return {
        rsid: this.rsid,
        chrom: this.chrom,
        pos: this.pos,
        ref: this.ref,
        alts: this.alts,
        variant_ids: this.variantIds,
        frequency_tables: (0, _caseFunctions.snakeCaseObjectKeys)(this.frequencyTables),
        genes: (0, _caseFunctions.snakeCaseObjectKeys)(this.genes),
        traits: (0, _caseFunctions.snakeCaseObjectKeys)(this.traits)
      };
    }
  }, {
    key: "deserializeAPI",
    value: function deserializeAPI(data) {
      this.rsid = data.rsid;
      this.chrom = data.chrom;
      this.pos = data.pos;
      this.ref = data.ref;
      this.alts = data.alts;
      this.variantIds = data.variant_ids;
      this.frequencyTables = (0, _caseFunctions.camelCaseObjectKeys)(data.frequency_tables);
      this.genes = (0, _caseFunctions.camelCaseObjectKeys)(data.genes);
      this.traits = (0, _caseFunctions.camelCaseObjectKeys)(data.traits);
    }
  }, {
    key: "serializeRedux",
    value: function serializeRedux() {
      return {
        rsid: this.rsid,
        chrom: this.chrom,
        pos: this.pos,
        ref: this.ref,
        alts: this.alts,
        variantIds: this.variantIds,
        frequencyTables: this.frequencyTables,
        genes: this.genes,
        traits: this.traits
      };
    }
  }], [{
    key: "resourceName",
    get: function get() {
      return "open-target-snp";
    }
  }, {
    key: "serviceName",
    get: function get() {
      return "genes";
    }
  }, {
    key: "apiFactory",
    value: function apiFactory(data) {
      var snp = new OpenTargetSnp(data.rsid, data.chrom, data.pos, data.ref, data.alts, data.variant_ids, (0, _caseFunctions.camelCaseObjectKeys)(data.frequency_tables), (0, _caseFunctions.camelCaseObjectKeys)(data.genes), (0, _caseFunctions.camelCaseObjectKeys)(data.traits));
      return snp;
    }
  }, {
    key: "reduxFactory",
    value: function reduxFactory(data) {
      var snp = new OpenTargetSnp(data.rsid, data.chrom, data.pos, data.ref, data.alts, data.variantIds, data.frequencyTables, data.genes, data.traits);
      return snp;
    }
    /**
     * Returns rsid to associated genes
     *
     * @param rsids
     */

  }, {
    key: "associatedGenes",
    value: function () {
      var _associatedGenes = _asyncToGenerator( /*#__PURE__*/regeneratorRuntime.mark(function _callee(rsids) {
        var server, payload, response;
        return regeneratorRuntime.wrap(function _callee$(_context) {
          while (1) {
            switch (_context.prev = _context.next) {
              case 0:
                server = new _common.APIServer();
                payload = {
                  rsid: rsids.join(",")
                };
                _context.next = 4;
                return server.get("".concat(this.path, "/associated-genes/"), undefined, payload);

              case 4:
                response = _context.sent;

                if (!response.error) {
                  _context.next = 7;
                  break;
                }

                throw new _common.APIResponseError("Error while getting associated genes", response);

              case 7:
                return _context.abrupt("return", response.data);

              case 8:
              case "end":
                return _context.stop();
            }
          }
        }, _callee, this);
      }));

      function associatedGenes(_x) {
        return _associatedGenes.apply(this, arguments);
      }

      return associatedGenes;
    }()
  }]);

  return OpenTargetSnp;
}(_common.Resource);

exports.OpenTargetSnp = OpenTargetSnp;
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