## AuspiceInteractive exploration of phylodynamic & phylogenomic data.

Communicating scientific results while also allowing interrogation of the underlying data is an integral part of the scientific process. Current scientific publishing practices hinder both the rapid dissemination of epidemiologically relevant results and the ability to easily interact with the data which was used to draw the inferences. Initially developed as part of the nextstrain project, it is a more general tool for building different websites to support these aims.

## Interactive visualisation

Visualisation of bioinformatics results is an integral part of current phylodynamics, both for data exploration and communication. We wanted to build a tool that was highly interactive, versatile and customisable.
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## Run auspice locally

Run auspice on your computer to display and interact with your own datasets.
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## Build your own custom website

Auspice is a communication platform to quickly disseminate results to the wider community. Use it to generate server-backed or serverless websites to display your own datasets, with as many customisations as you desire.
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## Auspice is the software which powers:

### Nextstrain

Real-time tracking of pathogen evolution

## Use Augur for bioinformatics

Augur is a seperate toolkit for phylodynamic analysis with a focus on pathgen and outbreak tracking. It's designed to work seamlessly with auspice. See the nextstrain documentation to find out more.

## Status: In Development

We're actively developing auspice to be more versatile and able to power many different websites. As such, the current API's are in flux while we develop this functionality. If you are interested in helping us develop these ideas and would like to use auspice to build your website then please contact us via email or twitter.

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