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Olson"},"license":"MIT","homepage":"https://github.com/warelab/gramene-genetree-vis#readme","repository":{"type":"git","url":"git+ssh://git@github.com/warelab/gramene-genetree-vis.git"},"description":"Visualize a genetree using d3. t123","maintainers":[{"name":"mycrobe","email":"npm@mycro.be"},{"name":"ajo2995","email":"olson@cshl.edu"},{"name":"warelab","email":"warelab@gmail.com"}],"readme":"# Gramene Gene Tree Visualization\n\n![gene tree visualization example](https://raw.githubusercontent.com/warelab/gramene-genetree-vis/master/genetree_vis_example.png)\n\n\n\nThe Gramene Gene Tree Visualization is a JavaScript library for interactive visualization of gene tree data. It is primarily developed for use on the [Cold Spring Harbor Laboratory](http://cshl.edu)’s [Gramene](http://gramene.org) web site, but it is self-contained and can be dropped into any other web site.\n\n## Running the Visualization\n\nThe gene tree visualization can be run locally in a stand-alone mode for testing/viewing/developing.\n\n1. Install [Yarn](http://yarnpkg.com), a JavaScript dependency manager.\n\n2. From the project root directory, run Yarn to load dependencies (or install, as needed).\n\n   ```bash\n   % yarn\n   ```\n\n3. Compile and run standalone application in development mode:\n\n    ```bash\n    % yarn run start\n    ```\n\n\n​    Note that the application will connect to `devdata.gramene.org` to load sample data to display.\n\n4. Connect to `http://localhost:3000/` to view the visualization.\n\n\n\n## Misc.\n\nThe development project was created with [Create React App](https://github.com/facebookincubator/create-react-app). You can view [this guide](https://github.com/facebookincubator/create-react-app/blob/master/packages/react-scripts/template/README.md) to for details about that environment.","readmeFilename":"README.md"}