{"_id":"hdf5","_rev":"38-a985c920d72d23c19b444adf541efa0a","name":"hdf5","time":{"modified":"2022-06-18T19:41:32.089Z","created":"2014-11-19T18:25:06.297Z","0.0.1":"2014-11-19T18:25:06.297Z","0.0.2":"2014-11-21T20:32:39.300Z","0.0.3":"2014-12-03T16:58:35.147Z","0.0.4":"2014-12-05T15:21:35.014Z","0.0.5":"2015-02-15T00:21:40.184Z","0.0.6":"2015-02-15T00:58:48.746Z","0.0.7":"2015-03-11T00:24:42.698Z","0.0.8":"2015-03-11T14:27:09.512Z","0.0.10":"2015-04-11T16:07:03.792Z","0.0.11":"2015-04-11T17:30:32.266Z","0.0.12":"2015-04-13T03:45:25.477Z","0.0.17":"2015-05-23T20:18:08.584Z","0.0.18":"2015-05-23T20:45:06.209Z","0.0.19":"2015-08-13T19:02:25.712Z","0.0.20":"2015-09-17T12:12:23.521Z","0.1.0":"2015-10-15T11:24:18.554Z","0.2.0":"2016-05-14T16:47:22.903Z","0.2.1":"2016-05-14T17:06:37.667Z","0.3.1":"2017-02-18T21:23:54.279Z","0.3.2":"2017-09-11T14:59:06.492Z","0.3.3":"2017-09-19T00:08:34.550Z","0.3.4":"2018-08-23T12:33:17.280Z","0.3.5":"2018-12-23T14:01:19.053Z"},"maintainers":[{"name":"rimmartin","email":"mathmldashx@yahoo.com"}],"dist-tags":{"latest":"0.3.5"},"description":"Native Abstractions for hdf5 file io","readme":"[![NPM Version][npm-image]][npm-url]\r\n[![NPM Downloads][downloads-image]][npm-url]\r\n[![Node.js Version][node-version-image]][node-version-url]\r\n[![Build Status][travis-ci-build-image]][travis-ci-build-url]\r\n\r\nHDF5 is a node module for reading and writing the \r\n[HDF5](https://www.hdfgroup.org/HDF5/) file format.\r\n\r\n## Documentation\r\n\r\nAPI documentation is available at <http://hdf-ni.github.io/hdf5.node>\r\n\r\n```bash\r\nnpm install hdf5\r\n```\r\nSee <http://hdf-ni.github.io/hdf5.node/doc/install-setup.html> for the native \r\nrequirements and details. If your native hdf5 libraries aren't at the default \r\nyou can set the path with --hdf5_home_linux switch on this project as well as \r\ndependent projects.\r\n\r\n```bash\r\nnpm install hdf5 --hdf5_home_linux=<your native hdf path>\r\n```\r\nFor mac and windows the switches are --hdf5_home_mac & --hdf5_home_win\r\n\r\nTo install with yarn first need to configure so it knows where the libraries are:\r\n\r\n```\r\nyarn config set hdf5_home_linux $HDF5_HOME\r\nyarn install\r\n```\r\n\r\nNote: If node-gyp isn't installed\r\n\r\n```bash\r\nnpm install -g node-gyp\r\n```\r\n\r\nQuick start to open and read from an h5 file\r\n```javascript\r\nvar hdf5 = require('hdf5').hdf5;\r\n\r\nvar Access = require('hdf5/lib/globals').Access;\r\nvar file = new hdf5.File('/tmp/foo.h5', Access.ACC_RDONLY);\r\nvar group = file.openGroup('bar');\r\n```\r\n\r\n### Notes on Recent Releases\r\n\r\n* Note: Release v0.3.5\r\n  * Strictly for building on Windows.  Tested with VS 2017\r\n\r\n* Note: Release v0.3.4 \r\n  * Reference attributes on datasets and groups are now available properties.\r\n  * Reserved propeties such as type, rank, rows etc. are now settable in options for dataset functions.  \r\n  * Typescript definition files now available. \r\n  * For static native linkng, link_type command line switch is provided in binding.gyp(darwin,win untested).\r\n  * Added custom 64 bit signed (Int64) and unsigned (Uint64) integer attributes\r\n    read/write since they aren't yet supported by javascript.  \r\n  * Added a file method enableSingleWriteMultiRead (if native version older than 1.10.x it is a noop).\r\n  * Synchronous iterate and visit is now available on file and group children. \r\n  * Bug fixes on dimensioning have been made\r\n\r\n* Note: asynchronous i/o is coming but not in this release\r\n\r\n* Note: Release v0.3.3 Minor fix on fixed length of strings in array. Handles the situation where \r\nthe strings are contiguous without all having null bytes.\r\n\r\n* Note: Release v0.3.2 tested with nodejs v6.11.2, v7.5.0 and v8.4.0. Code was changed \r\nto allow v8.4.0 to work while still working with the earlier versions. It may work back as far as v4.2.1 \r\nlet me know if you have a version in between that needs testing. Variable length array of \r\nstrings can be be read as regions.\r\n\r\n* Note: Release v0.3.1 is based on new V8 API changes coming with nodejs v7.\r\n\r\n* Note: Release v0.1.0 was built with nodejs v4.2.1. If you want nodejs v0.12.x \r\nthen stay with  release v0.0.20. npm will continue with nodejs v4.x.x line and \r\nany fixes or features needed by prior versions will be from github branches.\r\n\r\n* Note: Release v0.0.20 is for prebuilts with hdf5-1.8.15-patch1. If you want\r\nhdf5-1.8.14 stay with v0.0.19.\r\n\r\n## Philosophy\r\n\r\nThis module, [hdf5.node][npm-url], is intended to be a pure API for reading\r\nand writing HDF5 files. Graphical user interfaces or other layers should\r\nbe implemented in separate modules.\r\n\r\nUnlike other languages that wrap hdf5 API's this interface takes advantage of\r\nthe compatibility of V8 and HDF5. The result is a direct map to javascript\r\nbehavior with the least amount of data copying and coding tasks for the user.\r\nHopefully you won't need to write yet another layer in your code to accomplish\r\nyour goals.\r\n\r\n\r\n## Other Feature Notes\r\n\r\nThe node::Buffer and streams are being investigated so native hdf5 data's only\r\ndestination is client browser window or client in general.\r\n\r\n\r\n### Dimension Scales\r\n\r\nMostly implemented (missing H5DSiterate_scales[ found a way to make callback\r\nfunctions from te native side and looking to finish this and use the technique\r\nfor other h5 iterators])\r\n\r\n### High-level Functions for Region References, Hyperslabs, and Bit-fields\r\n\r\nWriting an interface based on the standard hdf5 library.  Currently you can\r\nwrite and read a subset from a two rank dataset. Other ranks may work yet are\r\nuntested.\r\n See tutorial\r\n<http://hdf-ni.github.io/hdf5.node/tut/subset_tutorial.html> for example applied\r\nto node Buffers.\r\n \r\n### Filters and Compression\r\n\r\nTesting filters and compression.  Have the gzip filter working. For some\r\napplications getting the uncompressed data from the h5 would reduce the number\r\nof compressions and decompressions.  For example an image could be sent to\r\nclient before unzipping and rezipping on the server side.  \r\n\r\nThird party filters can be used.  Those do take separate compiled libraries\r\nyet are independent. They get picked up by native hdf5 from the\r\nHDF5_PLUGIN_PATH.               \r\n\r\n\r\n\r\n## Image\r\n\r\nThe h5im namespace is being designed to meet the Image Spec 1.2 <http://www.hdfgroup.org/HDF5/doc/ADGuide/ImageSpec.html>. Hyperslabs/regions\r\nof images can now be read.\r\n\r\n## Contributors\r\n* Christian Nienhaus ([@NINI1988](https://github.com/NINI1988)) added typescript definitions and many pull requests and bug fixes for hdf5 native calls.\r\n* John Shumway ([@shumway](https://github.com/shumway)) refurbished the documentation when the project was split into an organization.\r\n\r\n[npm-image]: https://badge.fury.io/js/hdf5.svg\r\n[npm-url]: https://www.npmjs.com/package/hdf5\r\n[downloads-image]: https://img.shields.io/npm/dm/hdf5.svg\r\n[node-version-image]: https://img.shields.io/node/v/hdf5.svg\r\n[node-version-url]: https://nodejs.org/en/download/\r\n[travis-ci-build-image]: https://travis-ci.org/HDF-NI/hdf5.node.svg?branch=master\r\n[travis-ci-build-url]: https://travis-ci.org/HDF-NI/hdf5.node\r\n","versions":{"0.0.2":{"name":"hdf5","version":"0.0.2","description":"Native Abstractions for hdf5 file 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